Table 2

SNPs found in FKBP12 and FKBP12.6 gene in cases.

Gene

Site

SNP

Troca

MAF: cases

(n = 186)

MAF: dbSNP

(YRI - CEU)


FKBP12

Intron 2

rs6074549

C/G

0.0026

0.008 - 0


FKBP12.6

Exon 1 - 5' UTR

rs116520786

C/T

0.14

0.25 - 0

Exon 1 - 5' UTR

rs111634163

C/T

0.06

NA

Intron 3

rs13016301

A/T

0.07

0 - 0.18

Intron 3

rs1424344

C/T

0.18

0.32 - 0

Exon 4 - 3'UTR

rs14388

C/T

0.17

0.4 - 0.008

Exon 4 - 3'UTR

rs114658911

C/T

0.005

0 - 0.005


MAF: Minor Allele Frequency; NA: Not Available; CEU: Northern and Western Europe; YRI: Yoruba in Ibadan, Nigeria

Biagi et al. Journal of Negative Results in BioMedicine 2012 11:4   doi:10.1186/1477-5751-11-4

Open Data