Table 2 |
|||||
|
SNPs found in FKBP12 and FKBP12.6 gene in cases. |
|||||
|
Gene |
Site |
SNP |
Troca |
MAF: cases (n = 186) |
MAF: dbSNP (YRI - CEU) |
|
|
|||||
|
FKBP12 |
Intron 2 |
rs6074549 |
C/G |
0.0026 |
0.008 - 0 |
|
|
|||||
|
FKBP12.6 |
Exon 1 - 5' UTR |
rs116520786 |
C/T |
0.14 |
0.25 - 0 |
|
Exon 1 - 5' UTR |
rs111634163 |
C/T |
0.06 |
NA |
|
|
Intron 3 |
rs13016301 |
A/T |
0.07 |
0 - 0.18 |
|
|
Intron 3 |
rs1424344 |
C/T |
0.18 |
0.32 - 0 |
|
|
Exon 4 - 3'UTR |
rs14388 |
C/T |
0.17 |
0.4 - 0.008 |
|
|
Exon 4 - 3'UTR |
rs114658911 |
C/T |
0.005 |
0 - 0.005 |
|
|
|
|||||
|
MAF: Minor Allele Frequency; NA: Not Available; CEU: Northern and Western Europe; YRI: Yoruba in Ibadan, Nigeria |
|||||
|
Biagi et al. Journal of Negative Results in BioMedicine 2012 11:4 doi:10.1186/1477-5751-11-4 |
|||||
