Table 4

IL23r Haplotype Association Analysis

Frequencies (%)


SNPs

Haplotype

Control

CD

UC

CD and UC combined

p-value

(CD vs. UC)


rs10489629 - rs11465804

G-G

3.91

2.25

4.52

3.16

0.048


rs1004819 - rs10489629 -rs11465804

C-G-G

3.94

2.06

4.36

2.95

0.045


rs1004819 - rs2201841 - rs11465804 - rs11209026

T-C-G-G

0.01

0.02

1.1

0.45

0.014


C-C-G-G

0

0.353

0

0.002

0.010


rs1004819 - rs10489629 -rs11465804 - rs11209026

C-A-G-G

0.4

0.78

0

0.1

0.016


T-A-G-G

0.03

0.006

1.34

0.61

0.028


rs1004819 - rs10489629 - rs2201841 - rs11465804

C-G-T-G

3.92

2.14

4.37

3.02

0.049


C-A-C-T

4.97

4.07

7.19

5.1

0.048


rs1004819 - rs10489629 - rs2201841 - rs11465804 - rs11209026

T-A-C-G-G

0.01

0.02

1.12

0.41

0.023


C-A-C-G-G

0

0.36

0

0.008

0.009


Kanaan et al. Journal of Negative Results in BioMedicine 2012 11:7   doi:10.1186/1477-5751-11-7

Open Data