Table 4 |
||||||
|
IL23r Haplotype Association Analysis |
||||||
|
Frequencies (%) |
||||||
|
|
||||||
|
SNPs |
Haplotype |
Control |
CD |
UC |
CD and UC combined |
p-value (CD vs. UC) |
|
|
||||||
|
rs10489629 - rs11465804 |
G-G |
3.91 |
2.25 |
4.52 |
3.16 |
0.048 |
|
|
||||||
|
rs1004819 - rs10489629 -rs11465804 |
C-G-G |
3.94 |
2.06 |
4.36 |
2.95 |
0.045 |
|
|
||||||
|
rs1004819 - rs2201841 - rs11465804 - rs11209026 |
T-C-G-G |
0.01 |
0.02 |
1.1 |
0.45 |
0.014 |
|
|
||||||
|
C-C-G-G |
0 |
0.353 |
0 |
0.002 |
0.010 |
|
|
|
||||||
|
rs1004819 - rs10489629 -rs11465804 - rs11209026 |
C-A-G-G |
0.4 |
0.78 |
0 |
0.1 |
0.016 |
|
|
||||||
|
T-A-G-G |
0.03 |
0.006 |
1.34 |
0.61 |
0.028 |
|
|
|
||||||
|
rs1004819 - rs10489629 - rs2201841 - rs11465804 |
C-G-T-G |
3.92 |
2.14 |
4.37 |
3.02 |
0.049 |
|
|
||||||
|
C-A-C-T |
4.97 |
4.07 |
7.19 |
5.1 |
0.048 |
|
|
|
||||||
|
rs1004819 - rs10489629 - rs2201841 - rs11465804 - rs11209026 |
T-A-C-G-G |
0.01 |
0.02 |
1.12 |
0.41 |
0.023 |
|
|
||||||
|
C-A-C-G-G |
0 |
0.36 |
0 |
0.008 |
0.009 |
|
|
|
||||||
|
Kanaan et al. Journal of Negative Results in BioMedicine 2012 11:7 doi:10.1186/1477-5751-11-7 |
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