Table 2 |
||||||
|
PCR primer and TaqMan® Probe Sequences |
||||||
|
Gene |
Rs number |
Trivial name |
Primer Forward |
Primer Reverse |
VIC Probe |
6FAM Probe |
|
|
||||||
|
TLR4 |
rs4986790 |
Asp299Gly |
CCATTGAAGAATTCCGATTAGCATA |
CACTCACCAGGGAAAATGAAGAA |
CCTCGATGATATTATT |
CTCGATGGTATTATTG |
|
CD14 |
rs2569190 |
-260 C>T |
GGAAATATTGCAATGAAGGATGTTT |
CTAGATGCCCTGCAGAATCCTT |
CTGTTACGGTCCCC |
TGTTACGGCCCCC |
|
MCP1 |
rs1024611 |
-2518 A>G |
GGGAGGGCATCTTTTCTTGAC |
GGTGAAGGGTATGAATCAGAAAAGA |
ACAGCTATCACTTTC |
AGACAGCTGTCACTTT |
|
IL12A |
rs2243138 |
+7506 A>T |
AACCAGGAGTCCCCGATCC |
GGCCCACTGCCCAACAG |
CCATGGAGTGGTACTG |
AGGCCATGGTGTGGT |
|
IL12A |
rs668998 |
+8707 A>G |
CCAATCTTTCTCCCTGTAAATGTGTT |
TGAATGTCTAATAGGGCAAGAATTTG |
TGCATGACAAACAT |
CTGCATGGCAAACA |
|
IL12A |
rs2243151 |
+9177 A>T |
TTATTGCATGGTTAGTTTTTCACTTTTT |
GGAGCATTGGAATGATTTGGTT |
AGCATACTACACTACTTG |
AGCATACTACACAACTT |
|
IL12A |
rs2133310 |
+9508 G>A |
GGGACCTAATTAACTGTGTTATTGTGA |
AGCGGGTGTTCTGATGTCTTG |
AGTGCCAACACCTAG |
TGCCAGCACCTAGT |
|
NOS2A |
rs944722 |
+524G>A |
CTCTGTTTCTCTGATCCCACTTTCT |
GTGATATGAGATCTCGCCACTACACT |
TGGAGTCTCTGTCACC |
ATGGAGTTTCTGTCACC |
|
TNF |
rs1799724 |
-857C>T |
GGTAGGAGAATGTCCAGGGCTAT |
AGGTCCTGGAGGCTCTTTCACT |
CCCTGTCTTCGTTAAG |
CCCTGTCTTCATTAAG |
|
PTGS1 |
rs5794 |
V444I |
GCATGAAACCCTACACCTCCTT |
GGGACTGCATCCAGGAAACA |
AGGAGCTCGTAGGTGA |
CAGGAGCTCATAGGT |
|
|
||||||
|
Landi et al. Journal of Negative Results in BioMedicine 2006 5:15 doi:10.1186/1477-5751-5-15 |
||||||
