Table 1

Primer List. List of primers used for DNA amplification and ASOH.

Primer name
Sequence
Temp °C

p47 Ex2F
GCTTCCTCCAGTGGGTAGTGGGATC
60
p47 161R
GGAACTCGTAGATCTCGGTGAAGC

Primer name
Sequence
Temp °C

p40 Ex2F
GTGCTGAGAGACGAATGTTGG
60
p40 Ex2R
GGGCAAGGTTCAGAGGTCAG

p40 Ex5F
GACGGGACATCTAGGCTGG
60
p40 Ex5R
GGCTCTGGCCATGTGGAAG

p40 Ex8F
TCTGAGGCGTGGCTCTGCTG
60
p40 Ex8R
GCTCATCTGGGAGCCACTGG

p40 Ex10F
ATGACACGGGCTTGTATCAGG
60
p40 Ex10R
GAGCTGAAGGTTTTTGCTGGTG

p40 86T
TGCTGACATCGAGGAGA
53
p40 86C
TGCTGACACCGAGGAGA
53
p40 353G
CCTGCTCAGCCTGCCGG
62
p40 353A
CCTGCTCAACCTGCCGG
61
p40 815C
ACGACCACCGCCCCTCA
58
p40 815T
ACGACCACTGCCCCTCA
56
p40 911C
GGACGTAGCGCTCATGG
57
p40 911A
GGACGTAGAGCTCATGG
55

Primer name
Sequence
Temp °C
p67 Ex3F
CTGGGCACCACAGGGAGCTA
58
p67 Ex3R
CACCAAGCCCGCAACACTGA

p67 Ex6F
GGGCTTCTATGTGGTTATCTCAA
60
p67 Ex6R
CCACAAGGAGGCTACCCTCTTCT

p67 Ex9F
GAGCCCAGGCAGGCTCAGTGTCAT
60
p67 Ex10R
GCCATCTCAAGGCGGGCTCAAGA

p67 Ex11F
GTGTTTCCCCACATCCAC
60
p67 Ex11R
AAGGCAGGGAGAGGAACT

p67 Ex13F
CAAGGGTTGGGCTAAAGGAC
60
p67 Ex14R
GTGTTCTCACACCACAGAGTCAG

p67 542G
TGTGGGCAGGCTGTTTC
55
p67 542A
TGTGGGCAAGCTGTTTC
53
p67 836C
CTGGGCCACGGTCATGT
57
p67 836T
CTGGGCCATGGTCATGT
55
p67 983G
CCCTGGAAGACCCCAGC
47
p67 983A
CCCTGGAAAACCCCAGC
47
p67 1105G
CTCAGCCCGGGCTCCCC
50
p67 1105A
CTCAGCCCAGGCTCCCC
50
p67 1167C
GCTGGAACACACTAAGCTG
54
p67 1167A
GCTGGAACAAACTAAGCTG
54
p67 1183C
CCAGCTATCGGCCTCGG
57
p67 1183T
CCAGCTATTGGCCTCGG
57

Primer name
Sequence
Temp °C

p22 Ex 2F
GACCCTGTCACTGTGCTGTG
61
p22 Ex 2R
GAGGCAAACAGCTCACTGTG

p22 Ex 3F
CTGAGCTGGGCTGTTCCTT
63
p22 Ex 3R
CCACCCAACCCTGTGAGC

p22 Ex 4F
CAGCAAAGGAGTCCCGAGT
60
p22 Ex 4R
GGAAAAACACTGAGGTAAGT

p22 Ex 5F
AAGGCTGAGAACACCCAGG
60
p22 Ex 5R
GCTCAGCCTACAGAGCCG

p22 Ex 6F
GACCCAGGTCCTGGCTGTG
60+DMSO
p22 Ex 6R
AGGCTCACGCGCTCCCGG

p22 85A
TCGTGGCCACAGCTGGG
59
p22 85G
TCGTGGCCGCAGCTGGG
59
p22 113T
GTGGTACTTTGGTGCCT
52
p22 113C
GTGGTACTCTGGTGCCT
52
p22 179A
GAAGAGGAAGAAGGGCT
51
p22 179C
GAAGAGGACGAAGGGCT
53
p22 214C
GACAGAAGCACATGACC
53
p22 214T
GACAGAAGTACATGACC
51
p22 403G
CGCCCATCGAGCCCAAG
59
p22 403A
CGCCCATCAAGCCCAAG
56
p22 521C
GCTGCGGCGGCGGCG
62
p22 521T
GCTGCGGTGGCGGCG
60

Primer name
Sequence
Temp °C
gp91phox Ex 9F
CTAAAGCAGAGATCTAAGTGG
61
gp91phox Ex 9R
ACGGTGACCACAGAAATAGCTACCT

gp91phox Ex 11F
GTTTCTAGGCATTCTGAGCATCAAG
61
gp91phox Ex 11R
GTTCGTAAGCCCTGTACACTATG

gp91phox Ex 12F
GTGCCTTGGTTAGAATAGCTTGTG
61
gp91phox Ex 12R
GTTGAAGATATCTGGAATCTTCTGTTG

gp91phox 907C
TGGTCACTCACCCTTTC
50
gp91phox 907A
TGGTCACTAACCCTTTC
48
gp91phox 1414G
ACAATGCCGGCTTCCTC
55
gp91phox 1414A
ACAATGCCAGCTTCCTC
53
gp91phox 1499A
GGAGAAAGATGTGATC
48
gp91phox 1499G
GGAGAAAGGTGTGATC
50

Primer name
Sequence
Temp °C

DUOX1 27F
AGAGAGATCTCCTCTCAAGG
58
DUOX1 27R
GGTCACCGGAAGAGCTGAG

DUOX1 28F
GGGACCTTGGAAGCTCCAG
58
DUOX1 28R
GGACGTCGAGAAGTGAAGAG

DUOX1 3532T
GGTCTGAGTTCCCCCAG
58
DUOX1 3532C
GGTCTGAGCTCCCCCAG
60
DUOX1 3647G
GCCGCCGCCGCAGTTTCC
66
DUOX1 3647A
GCCGCCGCCACAGTTTCC
63

Primer name
Sequence
Temp °C
DUOX2 Ex5F
ATGTTCTTTCCGACGTGGTGAG
63
DUOX2 Ex6R
GCGCCGCCCACATGAGCAG

DUOX2 Ex17F
GCCTGCTCAGACTCACAGAG
62
DUOX2 Ex17R
ACTCCTTAGGGATCTTGAGCAG

DUOX2 Ex24F
GATGCCTGCCAGATCCCCAG
62
DUOX2 Ex25R
TGGCCGCCGTGCCTCGTG

DUOX2 413T
TGGAGACCTCGTGTTCG
54
DUOX2 413C
TGGAGACCCCGTGTTCG
56
DUOX2 429A
CCGAACAGCGCGGGGAC
60
DUOX2 429C
CCGACCAGCGCGGGGAC
63
DUOX2 597-8GG
GCTTCTCGGGGGGACAG
58
DUOX2 597-8GA
GCTTCTCGAGGGGACAG
56
DUOX2 597-8CG
GCTTCTCCGGGGGACAG
58
DUOX2 597-8CA
GCTTCTCCAGGGGACAG
56
DUOX2 2048G
TGTGCTCCGTGTGGTCC
56
DUOX2 2048A
TGTGCTCCATGTGGTCC
54
DUOX2 3026G
CACTCCCCGGCTGTACA
56
DUOX2 3026A
CACTCCCCAGCTGTACA
52
DUOX2 3200T
CTTTGCCTTGCCACCCT
53
DUOX2 3200C
CTTTGCCTCGCCACCCT
55

Primer name
Sequence
Temp °C

TLR2 450F
ATTGCAAATCCTGAGAGTGG
58
TLR2 688R
GCAGTTCCAAACATTCCACG

TLR2 1141F
GCCTGTGAGGATGCCTGG
60
TLR2 1827R
GCACAGGACCCCCGTGAG

TLR2 1782F
GTGCTGTGCTCTGTTCCTG
60
TLR2 2392R
TCCCAACTAGACAAAGACTGG

TLR2 170T
GAAAAGATTTTGCTGGAC
53
TLR2 170Tdel
GAAAAGATTTGCTGGAC
53
TLR2 1892C
GGAAGCCCAGGAAAGCT
55
TLR2 1892A
GGAAGCACAGGAAAGCT
53
TLR2 2258G
CAAGCTGCGGAAGATAA
50
TLR2 2258A
CAAGCTGCAGAAGATAA
48

Primer name
Sequence
Temp °C
TLR9 Ex2F
GTGGGTGGAGGTAGAGCTG
60
TLR9 365R
ACAGCCAAGAAGGTGCTGG

TLR9 2501F
TGCTGCATCACCTCTGTGG
54
TLR9 2794R
TGCGGCTGCCATAGACCG

TLR9 13C
GTTTCTGCCGCAGCGCC
60
TLR9 13T
GTTTCTGCTGCAGCGCC
58
TLR9 237T
CACCTCCATGATTCTGA
52
TLR9 237G
CACCTCCAGGATTCTGA
54
TLR9 296C
GAACTGCCCGCCGGTTG
58
TLR9 296T
GAACTGCCTGCCGGTTG
60
TLR9 2588G
AAGTGGGCGAGATGAGG
57
TLR9 2588A
AAGTGGGCAAGATGAGG
55
TLR9 2644G
CGCAGAGCGCAGTGGCA
60
TLR9 2644A
CGCAGAGCACAGTGGCA
58

Primer name
Sequence
Temp °C
AAT Ex2F
TGTCGGCAAGTACTTGGCACAG
60
AAT Ex2R
CATAATGCATTGCCAAGGAGAG

AAT Ex3F
CAGATGATGAAGCTGAGCCTCG
65
AAT Ex3R
AGCCCTCTGGCCAGTCCTGATG

AAT Ex5F
GAGCAAGGCCTATGTGACAGG
60
AAT Ex5R
AGCTCAACCCTTCTTTAATGTCAT

AAT 374G
ACTCCTCCGTACCCTCA
56
AAT 374A
ACTCCTCCATACCCTCA
54
AAT 863A
GCACCTGGAAAATGAAC
50
AAT 863T
GCACCTGGTAAATGAAC
50
AAT 1096G
CCATCGACGAGAAAGGG
56
AAT 1096A
CCATCGACAAGAAAGGG
54

Lee et al. Journal of Negative Results in BioMedicine 2006 5:5   doi:10.1186/1477-5751-5-5

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