Table 1

Polymorphisms typed in the EDN, ECP, EPO and MBP genes.

Gene
Rs number
Location
Amino acid
Primer
Annealing temperature
Restriction enzyme

EDN
rs2013109
Intron 1
-
F: GGGTAAGTCAACGATCCCCAG
R: GGTCTTGGTTATGACACACACTGTAGT
69°C
HpyF10VI
EDN
rs10132319
Intron 1
-
F: GGGTAAGTCAACGATCCCCAG
R: GGTCTTGGTTATGACACACACTGTAGT
65°C
AciI
ECP
rs17792481
Intron 1
-
F: TGAGGGAGAGGTGAGCTGAAGT
R: TGATGTGCTGGATGGCAAAC
58°C
MboI
ECP
rs2073342
Exon 2
T124R
F: TACGCTGCCCTCATAACAGAACT
R: GAACTGGAACCACAGGATACCG
58°C
PstI
ECP
rs2233860
3' UTR
-
F: GTATGCAGACAGACCAGGAAGGA
R: TTGGCAGATGAGTGATGATGAGTA
61°C
RsaI
EPO
rs11652709
Exon 4
Q122H
F: CTACCCTGGCCTGGAGTAGAAG
R: CACGCACTTGTTGTTGCACC
64°C
HpyF10VI
EPO
rs3785496
Intron 6
-
F: ACTGGTTGTCACTTCCCCTCTC
R: CAAAACCTTGCTTAAAACTCCCTT
58°C
MseI
MBP
rs490358
Exon 2
-
F: GGAAAAAACAGAGAAAGAAAGACTGAA
R: CACTCCCACGGTCCCCTAAT
58°C
BslI
MBP
rs3741098
Intron 3
-
F: TGGTGGACAAAAACCTTACGTGTC
R: ATGCTGGGGGCATATCCGA
58°C
BsaHI

Parwez et al. Journal of Negative Results in BioMedicine 2008 7:9   doi:10.1186/1477-5751-7-9